ELM - instance DEG_APCC_TPR_1 in sequence P53197 at position 564

Instance

Accession	Acc. Gene-, Name	Start	End	Subsequence	Logic	PDB	Organism	Length
ELMI002491	P53197 CDH1 CDH1_YEAST	564	566	KPKAKVQPNSLIFDAFNQIR	TP	---	Saccharomyces cerevisiae S288c	566

Instance evidence

Evidence class	PSI-MI	Method	BioSource	PubMed	Logic	Reliability	Notes
experimental	MI:0676	tandem affinity purification		Kraft,2005	support	certain	InteractionDetection
experimental	MI:0573	mutation disrupting interaction	in vivo/in vitro	Kraft,2005	support	certain
experimental	MI:0074	mutation analysis	in vivo/in vitro	Kraft,2005	support	certain	FeatureDetection
experimental	MI:0096	pull down	in vivo/in vitro	Kraft,2005	support	certain	InteractionDetection
experimental	MI:0997	ubiquitinase assay	in vitro	Matyskiela,2009	support	certain	InteractionDetection
experimental	MI:0005	alanine scanning	in vivo/in vitro/in silico	Matyskiela,2009	support	certain	FeatureDetection
experimental	MI:0074	mutation analysis	in vivo/in vitro	Matyskiela,2009	support	certain	FeatureDetection
experimental	MI:0096	pull down	in vivo/in vitro	Matyskiela,2009	support	certain	InteractionDetection
experimental	MI:0517	radiolabel	in vitro	Passmore,2003	support	certain
experimental	MI:0404	comigration in non denaturing gel electrophoresis	in vivo	Passmore,2003	support	certain	InteractionDetection
experimental	MI:0573	mutation disrupting interaction	in vivo/in vitro	Passmore,2003	support	certain
experimental	MI:0997	ubiquitinase assay	in vitro	Passmore,2003	support	certain	InteractionDetection
experimental	MI:0074	mutation analysis	in vivo/in vitro	Passmore,2003	support	certain	FeatureDetection

Interactions

Uniprot Id	Domain family	Domain Start	Domain End	Affinity Min/Max (µMol)	Notes
(P38042) CDC27_YEAST	SM00028 (TPR) Tetratricopeptide repeats.				[mitab][xml]
(P38042) CDC27_YEAST	SM00028 (TPR) Tetratricopeptide repeats.				[mitab][xml]

Pathways

KEGG: The sequence P53197 is implicated in the following 2 Pathways: (color codes: This sequence=red, interacting sequence=orange)

Please cite: The Eukaryotic Linear Motif resource: 2022 release. (PMID:34718738)

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